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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015953997.1_cds_XP_016492967.1_83123
CDS Infomation

[gene=LOC107812391] [db_xref=GeneID:107812391] [protein=alpha-ketoglutarate-dependent dioxygenase alkB homolog 6-like isoform X2] [protein_id=XP_016492967.1] [location=complement(join(643..957,1335..1447,17487..17525,18018..18078,18224..18313))] [gbkey=CDS]
Sequence

ATGAACGACTTCACCGTTGGGTCTGTACCCAATGTATTCTACATTCCAGATTTCATTTCT
GAGTCTGAACACGACCAGCTCTTGAATAATATAAACGGTGCGCCAATTTCTAAATGGAAA
TCTTTGAAAAACAGGAGATTGCAGAATTGGGGAGGAGTTGTGCATGAAAAAGGCCTTATA
GCTCAAGACTTGCCTCCTTGGTTAACTAGAATTACAGAGAGAATAAATGAGAAATCAGGG
TTATTTCCTTCATCAATTAATCATGTGCTTATCAATGAATACCTTCCTAACCAAGGAATA
ATGCCGCATCAAGATGGACCAGCTTATTATCCTGTAGTGGCAATTCTTTCTCTTGGATCT
CCTGTGGTTATGGATTTCACTCCACATCCTAATTTGAGCAGCAGTACACATGGAAACGGT
GTTGACGACAAAATTTCTGACCCGGGGCCTGCTGTGATGAATTCTGGTGAACAGCTGGAT
AGTTGCCATCCATTTTCTATCGTATTGATGCCTCGCAGTTTGTTGATATTCAAAGACTTG
GTGTACTCAGGTAAACTTTCTAGTTGGGTAGTTAGTTTCGACAGAACCACTCAGGTTACA
ATTCGACATACTGCCTGA

Peptide Sequence

PEP ID

XP_016492967.1
PEP Infomation

PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB homolog 6-like isoform X2 [Nicotiana tabacum]
Sequence

MNDFTVGSVPNVFYIPDFISESEHDQLLNNINGAPISKWKSLKNRRLQNWGGVVHEKGLI
AQDLPPWLTRITERINEKSGLFPSSINHVLINEYLPNQGIMPHQDGPAYYPVVAILSLGS
PVVMDFTPHPNLSSSTHGNGVDDKISDPGPAVMNSGEQLDSCHPFSIVLMPRSLLIFKDL
VYSGKLSSWVVSFDRTTQVTIRHTA

Transcript Sequence

Gene sequence data has not been registered.